Automata theory

Collage of two-dimensional words: Christian Choffrut and Berke Durak. Theoret. Comp. Sci , 340(2):364-380, 2005.
Two-Way Finite Automata with A Write-Once Track: Berke Durak. Journal of Automata, Languages and Combinatorics 12 (2007) 1/2 97-115

Dependency management

News from the EDOS project: improving the maintenance of free software distributions: Jaap Boender, Roberto Di Cosmo, Berke Durak, Xavier Leroy, Fabio Mancinelli, Mario Morgado, David Pinheiro, Ralf Treinen, Paulo Trezentos, Jérôme Vouillon. VIIth Workshop on Free Software , 2006.
Improving the Quality of GNU/Linux Distributions: Jaap Boender, Roberto Di Cosmo, Jerôme Vouillon, Berke Durak, Fabio Mancinelli. 32nd Annual IEEE International Computer Software and Applications Conference COMPSAC, pp.1240-1246, 2008